SubtiBank SubtiBank
ydiF [2017-07-20 17:32:26]
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ydiF [2017-07-20 17:32:26]

similar to ABC transporter (ATP-binding protein)
locus
BSU05950
pI
4.87
mw
73.27 kDa
protein length
642 aa Sequence Blast
gene length
1926 bp Sequence Blast
function
unknown
product
ABC transporter (ATP-binding protein)
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.1|ABC transporters] → [category|SW 1.2.1.4|Unknown ABC transporters]

    • Gene

    Coordinates
    644,528 → 646,456

    The protein

    Protein family

  • EF3 subfamily (according to Swiss-Prot)

    • Paralogous protein(s)

  • [protein|search|VfmR], [protein|47B644F334A0BD501E77A198A61CE0F22BAB3E5E|YfmM], [protein|2F79DB15D359A127C2D833CC0465E18E1725F539|YkpA]

    • Structure

  • [PDB|3J5S] (EttA from E. coli, 34% identity) [pubmed|24389465]
  • [PDB|4FIN] (EttA from E. coli, 34% identity) [pubmed|24389466]

    • Expression and Regulation

    Operons

    genes
    [gene|1F56D3275386BB54A774BFA045C09E36D1268471|ydiF]
    description
    [pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-C199 (ydiF::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2197 NBRP B. subtilis, Japan]

    • References

    Reviews

  • 24500425

    • Original publications

  • 10092453,20525796,24389466,24389465,27006457