SubtiBank SubtiBank
ybfP
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ybfP

similar to transcription factor (AraC family)
Locus
BSU_02320
Isoelectric point
6.28
Molecular weight
34.06 kDa
Protein length
295 aa Sequence Blast
Gene length
888 bp Sequence Blast
Function
unknown
Product
unknown
Essential
no
Synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
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Categories containing this gene/protein

  • Information processing → Regulation of gene expression → Transcription factors and their control → Transcription factor/ other/ based on similarity
  • Lifestyles → Coping with stress → Cell envelope stress proteins (controlled by SigM, V, W, X, Y)

    • Gene

    Coordinates
    251,427 252,314

    The protein

    Protein family

  • AraC family

    • Domains

  • HTH araC/xylS-type domain (aa 8-106) (according to UniProt)

    • Expression and Regulation

    Operons

    Genes
    ybfO-ybfP-ybfQ
    Description
    PubMed

    Sigma factors

  • SigW: sigma factor, PubMed, in SigW regulon

    • Regulatory mechanism

  • AbrB: repression, PubMed, in AbrB regulon

    • Regulation

  • repressed during logarithmic growth (AbrB) PubMed
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    Genes
    ybfO-ybfP
    Description
    PubMed

    Regulation

  • repressed during logarithmic growth (AbrB) PubMed
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    Biological materials

    Mutant

  • BKE02320 (ybfP::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATTGCACGCTCCAATCTCC, downstream forward: _UP4_TAGTTTTCAGACAACTACTT
  • BKK02320 (ybfP::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATTGCACGCTCCAATCTCC, downstream forward: _UP4_TAGTTTTCAGACAACTACTT

    • References

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