yycC

unknown

locus: BSU_40470

pI: 6.06

mw: 5.12 kDa

protein length: 46 aa

gene length: 141 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

Gene

Coordinates: 4,159,577 4,159,717

The protein

Protein family

• [SW|metallo-beta-lactamase superfamily] (according to UniProt)

Expression and Regulation

Operons

• genes: [gene|1CB229DE87D56674903A8348657FA3B3117FEADD|yycC]-[gene|00F319EEC8420F859BA2657B9D4D1281853A94BD|yycB]
  description: [Pubmed|12823818]

  regulatory mechanism

  • [protein|857EF1AC54DEA0690C01B7F8CEFFD16312C58F20|TnrA]: repression, [Pubmed|12823818], in [regulon|857EF1AC54DEA0690C01B7F8CEFFD16312C58F20|TnrA regulon]

  regulation

  • repressed in the absence of good nitrogen sources (glutamine or ammonium) ([protein|search|TnrA]) [Pubmed|12823818]

• genes: [gene|1CB229DE87D56674903A8348657FA3B3117FEADD|yycC]-[gene|00F319EEC8420F859BA2657B9D4D1281853A94BD|yycB]-[gene|CFEA05E10517C00222126F959A1D2DCE7604E478|yycA]
  description: [Pubmed|22383849]

  regulatory mechanism

  • [protein|857EF1AC54DEA0690C01B7F8CEFFD16312C58F20|TnrA]: repression, [Pubmed|12823818], in [regulon|857EF1AC54DEA0690C01B7F8CEFFD16312C58F20|TnrA regulon]

  regulation

  • repressed in the absence of good nitrogen sources (glutamine or ammonium) ([protein|857EF1AC54DEA0690C01B7F8CEFFD16312C58F20|TnrA]) [Pubmed|12823818]

Biological materials

Mutant

• MGNA-B831 (yycC::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1830 NBRP B. subtilis, Japan]
• BKE40470 ([gene|1CB229DE87D56674903A8348657FA3B3117FEADD|yycC]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE40470 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACAAAAGATCCCTCCTCTC, downstream forward: _UP4_TAGCCTTCATTCACATACTT
• BKK40470 ([gene|1CB229DE87D56674903A8348657FA3B3117FEADD|yycC]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK40470 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACAAAAGATCCCTCCTCTC, downstream forward: _UP4_TAGCCTTCATTCACATACTT

References

• 12823818,25755103