SubtiBank SubtiBank
ysdA
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ysdA

unknown
Locus
BSU_28840
Isoelectric point
9.96
Molecular weight
10.18 kDa
Protein length
Gene length
270 bp Sequence Blast
Function
unknown
Product
unknown
Essential
no
Synonyms

Genomic Context

      
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Categories containing this gene/protein

Gene

Coordinates
2,951,898 2,952,167

The protein

Localization

  • cell membrane (according to UniProt)
  • Expression and Regulation

    Operons

    Description

    Regulatory mechanism

  • stringent response: negative regulation, in stringent response
  • RplT: termination, via binding to a RNA switch in the infC leader region causes transcription termination, in RplT regulon
  • Regulation

  • RelA dependent downregulation (Class I) during stringent response PubMed
  • Additional information

  • autorepression of infC-rpmI-rplT-ysdA expression upon binding of excess RplT to the untranslated region of the mRNA PubMed
  • expression of IF3 is uncoupled from that of L35 and L20 by RNase Y-dependent mRNA processing PubMed
  • the RNA switch RNA is degraded by RNase Y PubMed
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    Biological materials

    Mutant

  • GP2391 ∆ysdA::kan, available in Jörg Stülke's lab
  • MGNA-B024 (ysdA::erm), available at the NBRP B. subtilis, Japan
  • BKE28840 (ysdA::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATGTTGCCTCATCCTTTAT, downstream forward: _UP4_GATTTATAAAAAGCAGAAAA
  • BKK28840 (ysdA::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATGTTGCCTCATCCTTTAT, downstream forward: _UP4_GATTTATAAAAAGCAGAAAA
  • References

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