SubtiBank SubtiBank
yshE [2019-07-08 11:36:00]
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yshE [2019-07-08 11:36:00]

unknown
locus
BSU28570
pI
4.46
mw
14.87 kDa
protein length
134 aa Sequence Blast
gene length
405 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    2,920,517 2,920,921

    The protein

    Protein family

  • UPF0719 family (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    genes
    [gene|EAD44AA7D72510B70308FD0C9F159DBEDAEBBB74|zapA]-[gene|93726C423313C653C4F71CB107FA12F686959E41|yshB]-[gene|D3954F2BCF6CE66505E4F48FCB4A61EE8D24F6D3|polX]-[gene|F8E82D9AE514B31892FE4530532691274ADA682B|mutSB]-[gene|18CEF3F1EE2E95A009699DE370CBB44F025B7B40|yshE]
    description
    [Pubmed|22383849]

    regulation

  • constitutively expressed [Pubmed|23701187]
    • view in new tab

    genes
    [gene|18CEF3F1EE2E95A009699DE370CBB44F025B7B40|yshE]
    description
    [Pubmed|8969504]

    additional information

  • the mRNA is very stable (half-life > 15 min) [http://www.ncbi.nlm.nih.gov/sites/entrez/12884008 PubMed]
    • view in new tab

    Biological materials

    Mutant

  • MGNA-A990 (yshE::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/990 NBRP B. subtilis, Japan]
  • BKE28570 ([gene|18CEF3F1EE2E95A009699DE370CBB44F025B7B40|yshE]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE28570 BGSC], [Pubmed|28189581], upstream reverse: _UP1_ATCACTCATGGCCATACTCC, downstream forward: _UP4_TAAGGGGACGGAGAATAGAT
  • BKK28570 ([gene|18CEF3F1EE2E95A009699DE370CBB44F025B7B40|yshE]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK28570 BGSC], [Pubmed|28189581], upstream reverse: _UP1_ATCACTCATGGCCATACTCC, downstream forward: _UP4_TAAGGGGACGGAGAATAGAT

    • References

  • 12884008,8969504