yvdR

similar to multidrug-efflux transporter

Locus: BSU_34500

Isoelectric point: 9.06

Molecular weight: 11.29 kDa

Protein length: 106 aa

Gene length: 321 bp

Function: unknown

Product: subunit of unidentified multidrug transporter

Essential: no

Synonyms

Genomic Context

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Categories containing this gene/protein

• Cellular processes → Transporters → Transporters/ other → Multidrug exporters
• Information processing → Protein synthesis, modification and degradation → Chaperone/ protein folding/ based on similarity
• Groups of genes → Membrane proteins

Gene

Coordinates: 3,541,823 3,542,143

The protein

Protein family

• paired small multidrug resistance protein family (PSMR family) PubMed
• drug/metabolite transporter (DMT) superfamily (according to UniProt)
• Small multidrug resistance (SMR) (TC 2.A.7.1) family (according to UniProt)

Structure

• 3B5D (E. coli EmrE, 33% identity) PubMed

Localization

• cell membrane (according to UniProt)

Expression and Regulation

Operons

• Genes: yvdT-yvdS-yvdR
  Description: PubMed

Biological materials

Mutant

• MGNA-B618 (yvdR::erm), available at the NBRP B. subtilis, Japan
• BKE34500 (yvdR::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATTATTTTTCACCTCCCGG, downstream forward: _UP4_TAAAATCAAGGCATATACAG
• BKK34500 (yvdR::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATTATTTTTCACCTCCCGG, downstream forward: _UP4_TAAAATCAAGGCATATACAG

References

Research papers

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