ydfB [2018-06-19 17:39:57]

similar to antibiotic resistance protein

locus: BSU05350

pI: 5.70

mw: 29.53 kDa

protein length: 261 aa

gene length: 783 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

Gene

Coordinates: 581,694 → 582,479

The protein

Protein family

• N-acetyltransferase domain (according to Swiss-Prot)

Structure

• [PDB|3G3S] (from Streptococcus suis, 27% identity)

Expression and Regulation

Operons

• genes: [gene|17921229BA265111A7D0CD95BA02A7A495CCA33D|ydfB]
  description: [pubmed|22383849]

Biological materials

Mutant

• MGNA-C142 (ydfB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2140 NBRP B. subtilis, Japan]
• BKE05350 (Δ[gene|17921229BA265111A7D0CD95BA02A7A495CCA33D|ydfB]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE05350 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAACTCCTTTAAAACACCGT, downstream forward: _UP4_TAACCTTAATGAAAGAACCT
• BKK05350 (Δ[gene|17921229BA265111A7D0CD95BA02A7A495CCA33D|ydfB]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK05350 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAACTCCTTTAAAACACCGT, downstream forward: _UP4_TAACCTTAATGAAAGAACCT

References

• 27766092