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ytoP [2019-06-27 12:09:49]
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ytoP [2019-06-27 12:09:49]

similar to glutamyl aminopeptidase
locus
BSU29860
pI
5.65
mw
39.08 kDa
protein length
357 aa Sequence Blast
gene length
1074 bp Sequence Blast
function
unknown
product
putative glutamyl aminopeptidase
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]

    • Gene

    Coordinates
    3,055,247 3,056,320

    The protein

    Protein family

  • Peptidase M42 family (with [protein|D6F5F7C1C699C674FA7AC09A020E8E2F571E1AA9|YsdC]and [protein|EDD5ACB89661D3B6D77057863EF345EBF84F49B2|YhfE], according to UniProt)

    • Paralogous protein(s)

  • [protein|D6F5F7C1C699C674FA7AC09A020E8E2F571E1AA9|YsdC]

    • Structure

  • [PDB|3KL9] (PepA from Streptococcus pneumoniae, 44% identity) [pubmed|19914209]

    • Expression and Regulation

    Operons

    genes
    [gene|16585F4118F3D2732D6780D351B7AA5F6DDCCEB8|ytoP]
    description
    [pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-A436 (ytoP::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/436 NBRP B. subtilis, Japan]
  • BKE29860 ([gene|16585F4118F3D2732D6780D351B7AA5F6DDCCEB8|ytoP]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE29860 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTTTTCCCCTCATTTCT, downstream forward: _UP4_TAGGTTTCATAAAAGCTTGT
  • BKK29860 ([gene|16585F4118F3D2732D6780D351B7AA5F6DDCCEB8|ytoP]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK29860 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTTTTCCCCTCATTTCT, downstream forward: _UP4_TAGGTTTCATAAAAGCTTGT

    • References

    Research papers

  • 19914209