oxdD [Tue Dec 13 2016 11:16:33 GMT+0100 (CET)]

oxalate decarboxylase, inner spore coat protein

locus: BSU18670

pI: 5.36

mw: 43.00 kDa

function: protection of the spore

product: oxalate decarboxylase

essential: no

ec: 4.1.1.2

synonyms: yoaN

Genomic Context

categories

• [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.1|Spore coat proteins] → [category|SW 4.2.1.1.5|Class V]
• [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.10|Resistance against other toxic compounds (nitric oxide, phenolic acids, flavonoids, oxalate)]

[SW|Categories] containing this gene/protein

• [SW|sporulation proteins], [SW|resistance against other toxic compounds (nitric oxide, phenolic acids, flavonoids, oxalate)]

This gene is a member of the following [SW|regulons]

• [SW|SigK regulon], [SW|GerE regulon]

Gene

Coordinates on the chromosome (coding sequence): 2,037,601 -> 2,038,779

The protein

Catalyzed reaction/ biological activity

• Oxalate = formate + CO₂ (according to Swiss-Prot)

Protein family

• UPF0361 family (according to Swiss-Prot)

Paralogous protein(s)

• [protein|search|OxdC]

[SW|Localization]

• inner spore coat, localization depends on [protein|search|SafA] [Pubmed|22171814]

Expression and Regulation

Operon

• ''oxdD'' [Pubmed|14973022]

[SW|Sigma factor]

• [protein|search|SigK] [Pubmed|15699190,14973022]

Regulation

• expressed late during sporulation in the mother cell ([protein|search|SigK], [protein|search|GerE]) [Pubmed|14973022]

Regulatory mechanism

• [protein|search|GerE]: transcription repression [Pubmed|14973022]

References

Reviews

• 20464388,23202530

Original publications

• 11546787,15699190,14973022,20601499,22171814