SubtiBank SubtiBank
oxdD
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oxdD

oxalate decarboxylase, inner spore coat protein
Locus
BSU_18670
Isoelectric point
5.36
Molecular weight
43.39 kDa
Protein length
392 aa Sequence Blast
Gene length
1179 bp Sequence Blast
Function
protection of the spore
Product
oxalate decarboxylase
Essential
no
E.C.
4.1.1.2
Synonyms
yoaN

Genomic Context

      
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Categories containing this gene/protein

Gene

Coordinates
2,037,601 2,038,779

The protein

Catalyzed reaction/ biological activity

  • H+ + oxalate --> CO2 + formate (according to UniProt)
  • Paralogous protein(s)

    Structure

  • 1L3J (OxdC, 59% identity) PubMed
  • Localization

  • inner spore coat, localization depends on SafA PubMed
  • Expression and Regulation

    Operons

    Genes
    Description

    Sigma factors

  • SigK: sigma factor, PubMed, in SigK regulon
  • Regulatory mechanism

  • GerE: repression, PubMed, in GerE regulon
  • Regulation

  • expressed late during sporulation in the mother cell (SigK, GerE) PubMed
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    Biological materials

    Mutant

  • MGNA-A842 (yoaN::erm), available at the NBRP B. subtilis, Japan
  • BKE18670 (oxdD::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATGCACCTCGTTTTAGAAA, downstream forward: _UP4_TAAAGACGTAACAGATCACA
  • BKK18670 (oxdD::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATGCACCTCGTTTTAGAAA, downstream forward: _UP4_TAAAGACGTAACAGATCACA
  • References

    Reviews

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    Original publications

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