yraD [2019-06-26 08:30:26]

forespore-specific sporulation protein, similar to spore coat protein

locus: BSU26990

pI: 4.52

mw: 11.15 kDa

protein length: 99 aa

gene length: 300 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.2|Spore coat protein/ based on similarity]

Gene

Coordinates: 2,754,820 2,755,119

The protein

Protein family

• cotF family (according to Swiss-Prot)

Expression and Regulation

Operons

• genes: [gene|7D61DB3A298C253BBC1C7B3AE169F8AAAE4610BB|yraG]-[gene|30A4306899B586898BC5B3666AD43D9DEE0579E1|yraF]-[gene|EA4CC0D36C39957DBBF9B1B11F65F33E8CD81FFE|adhB]-[gene|1D9D20DA24C13EF450710E8EDC5A36311DAF1BF0|yraE]-[gene|0D99D9ECB3BCD6E3F58F8CE8E8CC5AF718C1ECD8|yraD]
  description: [Pubmed|16497325]

  sigma factors

  • [protein|5F24258282F3166B7696B9E9ABC1706E4D06C944|SigG]: sigma factor, [Pubmed|16497325], in [regulon|5F24258282F3166B7696B9E9ABC1706E4D06C944|SigG regulon]

  regulation

  • expressed during sporulation in the forespore ([protein|search|SigG]) [Pubmed|16497325]

additional information

• the mRNA belongs to the 46 most abundant mRNA species in dormant spores [pubmed|30782632]

Biological materials

Mutant

• BKE26990 ([gene|0D99D9ECB3BCD6E3F58F8CE8E8CC5AF718C1ECD8|yraD]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE26990 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AGGATTCATGATTTATTCAT, downstream forward: _UP4_TAACATACAATGACTGATTT
• BKK26990 ([gene|0D99D9ECB3BCD6E3F58F8CE8E8CC5AF718C1ECD8|yraD]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK26990 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AGGATTCATGATTTATTCAT, downstream forward: _UP4_TAACATACAATGACTGATTT

References

• 16497325,30782632