SubtiBank SubtiBank
trpS [Sun Nov 06 2016 18:27:32 GMT+0100 (CET)]
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

trpS [Sun Nov 06 2016 18:27:32 GMT+0100 (CET)]

tryptophanyl-tRNA synthetase
locus
BSU11420
pI
6.00
mw
37.00 kDa
function
translation
product
tryptophanyl-tRNA synthetase
essential
yes
ec
6.1.1.2
synonyms

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.3|Protein synthesis, modification and degradation] → [category|SW 3.3.1|Translation] → [category|SW 3.3.1.10|Aminoacyl-tRNA synthetases]
  • [category|SW 6|Groups of genes] → [category|SW 6.1|Essential genes]
  • [SW|Categories] containing this gene/protein

  • [SW|translation], [SW|essential genes]
  • This gene is a member of the following [SW|regulons]

  • [SW|T-box]
  • Gene

    Coordinates on the chromosome (coding sequence)
    1,218,113 -> 1,219,105

    Phenotypes of a mutant

  • essential [Pubmed|12682299]
  • The protein

    Catalyzed reaction/ biological activity

  • ATP L-tryptophan tRNA(Trp) = AMP diphosphate L-tryptophyl-tRNA(Trp) (according to Swiss-Prot)
  • Protein family

  • class-I aminoacyl-tRNA synthetase family (according to Swiss-Prot)
  • Structure

  • [PDB|3PRH] (Val144Pro mutant) [Pubmed|21224416]
  • [PDB|1BM2] (complex with tryptophan, ''Geobacillus stearothermophilus'')
  • [PDB|1MAW] (complex with ATP, ''Geobacillus stearothermophilus'')
  • [SW|Localization]

  • cytoplasm (according to Swiss-Prot)
  • Expression and Regulation

    Operon

  • ''trpS'' [Pubmed|8915527]
  • Regulation

  • induced by tryptophan limitation ([protein|search|T-box]) [Pubmed|8915527]
  • Regulatory mechanism

  • [protein|search|T-box]: transcriptional antitermination in the absence of tryptophan (upon tRNA-binding to the mRNA leader region) [Pubmed|8915527]
  • Additional information

  • A [protein|search|ncRNA] is predicted between '[protein|search|trpS]' and '[protein|search|oppA]' [PubMed|20525796]
  • References

    Reviews

  • 11163353
  • Original publications

  • 19258532,8932308,8915527,21224416,20525796,26555258