SubtiBank SubtiBank
swrAA/2
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swrAA/2

control of DegU activity, enhances sigD transcription, part of the swrAA pseudogene
Locus
BSU_35239
Isoelectric point
0.00
Molecular weight
0.00 kDa
Protein length
Gene length
117 bp Sequence Blast
Function
essential for swarming differentiation on solid surfaces
Product
swarming motility protein
Essential
no
Synonyms
Outlinks

Genomic Context

      
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Categories containing this gene/protein

Gene

Coordinates
3,621,931 3,622,047

The protein

  • see SwrA
  • Expression and Regulation

    Operons

    Description

    Sigma factors

  • SigA: sigma factor, PubMed, in SigA regulon
  • SigD: sigma factor, PubMed, in SigD regulon
  • Regulatory mechanism

  • DegU: activation, DegU-P, (SigA promoter) PubMed, in DegU regulon
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    Description

    Sigma factors

  • SigD: sigma factor, PubMed, in SigD regulon
  • SigA: sigma factor, PubMed, in SigA regulon
  • Regulatory mechanism

  • DegU: activation, DegU-P, (SigA promoter) PubMed, in DegU regulon
  • Additional information

  • SwrA levels are 3 ... 10-fold increased on solid medium as compared to liquid medium (due to LonA/SmiA-mediated degradation of SwrA in liquid medium) PubMed
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    Biological materials

  • see SwrA
  • Mutant

  • BKE35239 (swrAA/2::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATTCTCGCTAACGTTACTC, downstream forward: _UP4_GGTTCACAATTGAAGAGGGC
  • BKK35239 (swrAA/2::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATTCTCGCTAACGTTACTC, downstream forward: _UP4_GGTTCACAATTGAAGAGGGC
  • Labs working on this gene/protein

  • see SwrA
  • References

  • see SwrA