ybfI

similar to transcription factor ([SW|AraC family])

locus: BSU_02220

pI: 6.10

mw: 32.29 kDa

protein length: 275 aa

gene length: 828 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.6|Transcription factor/ other/ based on similarity]

Gene

Coordinates: 242,834 243,661

The protein

Protein family

• [SW|AraC family]

[SW|Domains]

• [SW|HTH araC/xylS-type domain] (aa 171-268) (according to UniProt)

Expression and Regulation

Operons

• genes: [gene|0AD208CFDA10F7BED022583C8448EFA7E37B9E33|ybfI]-[gene|5084B6223B9F261E9FE1C65CD3F5FE20AF7E5ECE|ybfH]
  description: [Pubmed|22383849]

Biological materials

Mutant

• MGNA-B970 (ybfI::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1969 NBRP B. subtilis, Japan]
• BKE02220 ([gene|0AD208CFDA10F7BED022583C8448EFA7E37B9E33|ybfI]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE02220 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGGGATGCCTCCTGTCGG, downstream forward: _UP4_ATTTTTGAAAAGGAGCTTCA
• BKK02220 ([gene|0AD208CFDA10F7BED022583C8448EFA7E37B9E33|ybfI]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK02220 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGGGATGCCTCCTGTCGG, downstream forward: _UP4_ATTTTTGAAAAGGAGCTTCA

References

• 23504016