SubtiBank SubtiBank
yqjQ [2018-02-07T07:11:24.000Z]
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yqjQ [2018-02-07T07:11:24.000Z]

similar to ketoacyl reductase
locus
BSU23780
pI
9.16
mw
28.19 kDa
protein length
259 aa Sequence Blast
gene length
777 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]

    • Gene

    Coordinates
    2,471,002 → 2,471,781

    The protein

    Protein family

  • short-chain dehydrogenases/reductases (SDR) family (according to Swiss-Prot)

    • Paralogous protein(s)

  • [protein|18698DA427051097DEEE63F45F3429B8617B1F48|YxnA] (32,1%)

    • Structure

  • [PDB|3RKU] (from Saccharomyces Cerevisiae 36% identity)

    • Expression and Regulation

    Operons

    genes
    [gene|35B40D812B123766B469B8E5C0FE0EB69F671E4E|yqjP]-[gene|0927C7D45721F47F5ED2646CAAC324A308FD7724|yqjQ]-[gene|4E7390A74A8261E8B732E94859E90FE256AD64EE|dsdA]-[gene|B3362449EF3C9D533090FBD7E7333A3CC5D902CB|coaA]-[gene|441DCE4251C83FCBB01BC58720900365BFE7BB3D|yqjT]
    description
    [pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-C397 (yqjQ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2395 NBRP B. subtilis, Japan]
  • BKE23780 (Δ[gene|0927C7D45721F47F5ED2646CAAC324A308FD7724|yqjQ]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE23780 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TCCCGCTATATGTTTCACCC, downstream forward: _UP4_TAATGATAGAACTGCCTGTG
  • BKK23780 (Δ[gene|0927C7D45721F47F5ED2646CAAC324A308FD7724|yqjQ]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK23780 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TCCCGCTATATGTTTCACCC, downstream forward: _UP4_TAATGATAGAACTGCCTGTG