ydgE [2019-02-28 12:05:02]

protein N-acetyltransferase, may acetylate [protein|EFD8FC875B6787B1512C5FC4C81E7E4C9BD93028|HBsu]

locus: BSU05600

pI: 5.09

mw: 18.23 kDa

protein length: 157 aa

gene length: 474 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 3|Information processing] → [category|SW 3.3|Protein synthesis, modification and degradation] → [category|SW 3.3.4|Protein modification] → [category|SW 3.3.4.5|Protein acetylases/ deacetylases]

Gene

Coordinates: 604,103 604,576

The protein

Protein family

• [SW|Acetyltransferase family] (according to UniProt)

Paralogous protein(s)

• [protein|A1B9CF581D2D73AC3D2E290E6B86AD63BE0544DE|YycN]

Structure

• [PDB|1UFH] ([protein|A1B9CF581D2D73AC3D2E290E6B86AD63BE0544DE|YycN], 42% identity) [pubmed|14635137]

Expression and Regulation

Operons

• genes: [gene|0C2CD998B933D7458DBC4E80A596801274AC43F9|ydgC]-[gene|6DD46B2E342994CB97C13C00AB264B2D62184223|ydgD]-[gene|07A30814F57112196051289AA309AE6DB22CAEFF|ydgE]
  description: [Pubmed|22383849]

Biological materials

Mutant

• MGNA-C158 (ydgE::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2156 NBRP B. subtilis, Japan]
• BKE05600 ([gene|07A30814F57112196051289AA309AE6DB22CAEFF|ydgE]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE05600 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCCTGTATTCCTCCTTTA, downstream forward: _UP4_TGAAAAGCCGCTTACGTTAC
• BKK05600 ([gene|07A30814F57112196051289AA309AE6DB22CAEFF|ydgE]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK05600 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCCTGTATTCCTCCTTTA, downstream forward: _UP4_TGAAAAGCCGCTTACGTTAC

References

Research papers

• 14635137,30808761