yhcT [2017-11-27 18:14:07]

unknown

locus: BSU09210

pI: 9.64

mw: 33.59 kDa

protein length: 302 aa

gene length: 906 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 3|Information processing] → [category|SW 3.3|Protein synthesis, modification and degradation] → [category|SW 3.3.1|Translation] → [category|SW 3.3.1.3|rRNA modification and maturation/ based on similarity]
• [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.5|Newly identified sporulation proteins (based on transcription profiling)]

Gene

Coordinates: 995,624 → 996,532

The protein

Catalyzed reaction/ biological activity

• RNA uridine = RNA pseudouridine (according to Swiss-Prot)

Protein family

• S4 RNA-binding domain (according to Swiss-Prot)

Paralogous protein(s)

• [protein|2AECDA9C4D0E704976B9E2168722EC80FE7A256D|YjbO], [protein|C8C2E2F1B739F3D9A2FA6B460998708AAB2DA495|YlyB]

Expression and Regulation

Operons

• genes: [gene|964F04481DFA789CB0F7387B066BE2E2CF88D8E5|S319]-[gene|064AE8CE6D52E35582F90654AA9548963573C05C|yhcT]
  description: [Pubmed|22383849]

Biological materials

Mutant

• MGNA-A666 (yhcT::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/666 NBRP B. subtilis, Japan]
• BKE09210 (Δ[gene|064AE8CE6D52E35582F90654AA9548963573C05C|yhcT]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE09210 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTTAAATGGCTCCTTTT, downstream forward: _UP4_TGAAGAAAAGCCGCAGGCAC
• BKK09210 (Δ[gene|064AE8CE6D52E35582F90654AA9548963573C05C|yhcT]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK09210 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTTAAATGGCTCCTTTT, downstream forward: _UP4_TGAAGAAAAGCCGCAGGCAC