SubtiBank SubtiBank
ykoP
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ykoP

unknown
locus
BSU_13360
pI
10.37
mw
21.47 kDa
protein length
183 aa Sequence Blast
gene length
552 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.5|Newly identified sporulation proteins (based on transcription profiling)]

    • Gene

    Coordinates
    1,400,188 1,400,739

    Expression and Regulation

    Operons

    genes
    [gene|6BF3B54666B92C93FAEC09AE36CA83CD2A957515|S477]-[gene|018E9DEFC7BF236E0163D1945FC7AD07531063E8|ykoP]
    description
    [pubmed|22383849]

    sigma factors

  • [protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA]: sigma factor, [Pubmed|12354229], in [regulon|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA regulon]

    • regulatory mechanism

  • [protein|F899F1EE27E6D503BCC06BC52E3C7FD80B8EF725|Fur]: repression, [Pubmed|12354229], in [regulon|F899F1EE27E6D503BCC06BC52E3C7FD80B8EF725|Fur regulon]
  • [protein|1E829D639BADDC6BDC9B5FB4C97A632A53FDDB24|ResD]: activation, [Pubmed|24214949], in [regulon|1E829D639BADDC6BDC9B5FB4C97A632A53FDDB24|ResD regulon]
  • [protein|EC6697D5D945B7E5083AFED9218748763C443278|NsrR]: repression, [Pubmed|24214949], in [regulon|EC6697D5D945B7E5083AFED9218748763C443278|NsrR regulon]
  • [protein|65E2F7197D46F5C884CC96018EE4F3EEE94FFA18|Kre]: repression, in [regulon|65E2F7197D46F5C884CC96018EE4F3EEE94FFA18|Kre regulon]
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    Biological materials

    Mutant

  • MGNA-A761 (ykoP::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/761 NBRP B. subtilis, Japan]
  • BKE13360 ([gene|018E9DEFC7BF236E0163D1945FC7AD07531063E8|ykoP]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE13360 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCTTTTCACCTTCCTTAT, downstream forward: _UP4_TGATGCCTCGGTCAGCACAG
  • BKK13360 ([gene|018E9DEFC7BF236E0163D1945FC7AD07531063E8|ykoP]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK13360 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCTTTTCACCTTCCTTAT, downstream forward: _UP4_TGATGCCTCGGTCAGCACAG

    • References

  • 12354229,12107147,24214949,26110430