SubtiBank SubtiBank
pksJ
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pksJ

polyketide synthase
Locus
BSU_17180
Isoelectric point
5.00
Molecular weight
562.00 kDa
Protein length
5043 aa Sequence Blast
Gene length
15132 bp Sequence Blast
Function
polyketide synthesis
Product
polyketide synthase
Essential
no
Synonyms
pksK
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
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Categories containing this gene/protein

  • Metabolism → Additional metabolic pathways → Miscellaneous metabolic pathways → Biosynthesis of antibacterial compounds
  • Lifestyles → Coping with stress → Biosynthesis of antibacterial compounds

    • Gene

    Coordinates
    1,792,806 1,807,937

    The protein

    Protein family

  • ATP-dependent AMP-binding enzyme family (according to UniProt)

    • Domains

  • 5 Carrier domains (aa 590-667, aa 1654-1729, aa 3114-3188, aa 3212-3286, aa 4459-4536) (according to UniProt)

    • Structure

  • 4NA1 PubMed

    • Expression and Regulation

    Operons

    Genes
    pksC-pksD-pksE-acpK-pksF-pksG-pksH-pksI-pksJ-pksL-pksM-pksN-pksR
    Description
    PubMed

    Regulatory mechanism

  • AbrB: repression, PubMed, in AbrB regulon
  • CodY: activation, PubMed, in CodY regulon

    • Regulation

  • expressed during the transition from growth to stationary phase (AbrB, CodY) PubMed

    • Additional information

  • this is a very large operon comprising about 75 kb
    • view in new tab

    Genes
    pksB-pksC-pksD-pksE-acpK-pksF-pksG-pksH-pksI-pksJ-pksL-pksM-pksN-pksR
    Description
    PubMed
    view in new tab

    Biological materials

    Mutant

  • BKE17180 (pksJ::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATCACGCTGCCTCCATTTC, downstream forward: _UP4_ACTGCGGCAAACATATGGGA
  • BKK17180 (pksJ::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATCACGCTGCCTCCATTTC, downstream forward: _UP4_ACTGCGGCAAACATATGGGA

    • References

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