Difference between revisions of "YtnA"

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(Basic information/ Evolution)
Line 71: Line 71:
 
* '''Catalyzed reaction/ biological activity:'''  
 
* '''Catalyzed reaction/ biological activity:'''  
  
* '''Protein family:''' secondary amino acid transporter
+
* '''Protein family:'''  
 +
** secondary amino acid transporter
 +
** [[APC superfamily of transport proteins|amino acid, polyamine, organocation (APC) superfamily of transporters]], [http://www.tcdb.org/search/result.php?tc=2.A.3 TC 2.A.3]
  
 
* '''Paralogous protein(s):''' [[AapA]], [[GabP]], [[HutM]], [[RocC]], [[RocE]], [[YbgF]], [[YbxG]], [[YdgF]], [[YvbW]]
 
* '''Paralogous protein(s):''' [[AapA]], [[GabP]], [[HutM]], [[RocC]], [[RocE]], [[YbgF]], [[YbxG]], [[YdgF]], [[YvbW]]

Revision as of 19:52, 28 November 2013

  • Description: similar to proline permease

Gene name ytnA
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: ytnA
Metabolic function and regulation of this protein in SubtiPathways:
Asp, Asn
MW, pI 50 kDa, 9.912
Gene length, protein length 1389 bp, 463 aa
Immediate neighbours ytoA, asnB
Sequences Protein DNA DNA_with_flanks
Genetic context
YtnA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YtnA expression.png















Categories containing this gene/protein

transporters/ other, biosynthesis/ acquisition of amino acids, utilization of amino acids

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU30530

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

K Yoshida, Y Fujita, S D Ehrlich
Three asparagine synthetase genes of Bacillus subtilis.
J. Bacteriol.: 1999, 181(19);6081-91
[PubMed:10498721] [WorldCat.org] [DOI] (P p)