Difference between revisions of "YsxE"

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|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1023 bp, 341 aa  
 
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1023 bp, 341 aa  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[valS]]'', ''[[spoVID]]''
+
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yszA]]'', ''[[spoVID]]''
 
|-
 
|-
 
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB14770&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
 
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB14770&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''

Revision as of 10:17, 5 December 2012

  • Description: unknown

Gene name ysxE
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: ysxE
MW, pI 40 kDa, 5.635
Gene length, protein length 1023 bp, 341 aa
Immediate neighbours yszA, spoVID
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YsxE context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YsxE expression.png
























Categories containing this gene/protein

sporulation proteins

This gene is a member of the following regulons

SigE regulon

The gene

Basic information

  • Locus tag: BSU28100

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed early during sporulation in the mother cell (SigE) PubMed
    • repressed by casamino acids PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Leif Steil, Mónica Serrano, Adriano O Henriques, Uwe Völker
Genome-wide analysis of temporally regulated and compartment-specific gene expression in sporulating cells of Bacillus subtilis.
Microbiology (Reading): 2005, 151(Pt 2);399-420
[PubMed:15699190] [WorldCat.org] [DOI] (P p)

Ulrike Mäder, Georg Homuth, Christian Scharf, Knut Büttner, Rüdiger Bode, Michael Hecker
Transcriptome and proteome analysis of Bacillus subtilis gene expression modulated by amino acid availability.
J. Bacteriol.: 2002, 184(15);4288-95
[PubMed:12107147] [WorldCat.org] [DOI] (P p)

B Beall, A Driks, R Losick, C P Moran
Cloning and characterization of a gene required for assembly of the Bacillus subtilis spore coat.
J. Bacteriol.: 1993, 175(6);1705-16
[PubMed:8449878] [WorldCat.org] [DOI] (P p)