Difference between revisions of "YpgQ"

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Line 90: Line 90:
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU21890&redirect=T BSU21890]
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU21890&redirect=T BSU21890]
* '''Structure:'''
* '''Structure:''' [http://pdb.org/pdb/explore/explore.do?structureId=3B57 3B57] (the protein from Listeria innocua,)
* '''UniProt:''' [http://www.uniprot.org/uniprot/P54168 P54168]
* '''UniProt:''' [http://www.uniprot.org/uniprot/P54168 P54168]

Revision as of 12:45, 11 July 2014

  • Description: unknown

Gene name ypgQ
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: ypgQ
MW, pI 22 kDa, 5.514
Gene length, protein length 615 bp, 205 aa
Immediate neighbours ypgR, bsaA
Sequences Protein DNA DNA_with_flanks
Genetic context
YpgQ context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YpgQ expression.png

Categories containing this gene/protein

proteins of unknown function

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU21890

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

  • The E. coli homolog: yedJ

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: DMRL synthase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure: 3B57 (the protein from Listeria innocua,)
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks


Ye Ji Jeon, Wan Seok Song, Sung-il Yoon
Purification, crystallization and preliminary X-ray analysis of a putative nucleotide phosphohydrolase, YpgQ, from Bacillus subtilis.
Acta Crystallogr F Struct Biol Commun: 2014, 70(Pt 7);984-6
[PubMed:25005104] [WorldCat.org] [DOI] (I p)