Difference between revisions of "YcbU"

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* '''Description:''' cysteine desulfurase<br/><br/>
  
 
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|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU02660 ycbU]
 
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 40 kDa, 6.455   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 40 kDa, 6.455   
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|colspan="2" | '''Genetic context''' <br/> [[Image:ycbU_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:ycbU_context.gif]]
 
  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
 
  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
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|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ycbU_287499_288611_1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:ycbU_expression.png|500px]]
 
 
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* '''Operon:''' ''ycbU'' (according to [http://dbtbs.hgc.jp/COG/prom/ycbU.html DBTBS])
 
* '''Operon:''' ''ycbU'' (according to [http://dbtbs.hgc.jp/COG/prom/ycbU.html DBTBS])
  
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ycbU_287499_288611_1 ycbU] {{PubMed|22383849}}
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* '''[[Sigma factor]]:'''  
 
 
* '''Sigma factor:'''  
 
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  

Revision as of 10:50, 7 August 2012

  • Description: cysteine desulfurase

Gene name ycbU
Synonyms
Essential no
Product cysteine desulfurase
Function unknown
MW, pI 40 kDa, 6.455
Gene length, protein length 1110 bp, 370 aa
Immediate neighbours pcp, lmrB
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YcbU context.gif
This image was kindly provided by SubtiList





Categories containing this gene/protein

poorly characterized/ putative enzymes

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU02660

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: class-V pyridoxal-phosphate-dependent aminotransferase family (according to Swiss-Prot)

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon: ycbU (according to DBTBS)
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References