Difference between revisions of "AlsT"

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(Biological materials)
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* '''Mutant:'''
 
* '''Mutant:'''
 +
** GP1888 (tet) available in [[Jörg Stülke]]'s lab
  
 
* '''Expression vector:'''
 
* '''Expression vector:'''

Revision as of 14:06, 18 September 2014

  • Description: amino acid carrier protein

Gene name alsT
Synonyms
Essential no
Product amino acid carrier protein
Function amino acid uptake
Gene expression levels in SubtiExpress: alsT
Metabolic function and regulation of this protein in SubtiPathways:
alsT
MW, pI 50 kDa, 9.39
Gene length, protein length 1395 bp, 465 aa
Immediate neighbours ynfC, bglC
Sequences Protein DNA DNA_with_flanks
Genetic context
AlsT context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
AlsT expression.png




























Categories containing this gene/protein

transporters/ other, putative amino acid transporter, membrane proteins

This gene is a member of the following regulons

TnrA regulon

The gene

Basic information

  • Locus tag: BSU18120

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: sodium:alanine (SAF) symporter family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
    • repressed in the absence of good nitrogen sources (glutamine or ammonium) (TnrA) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Hannes Hahne, Susanne Wolff, Michael Hecker, Dörte Becher
From complementarity to comprehensiveness--targeting the membrane proteome of growing Bacillus subtilis by divergent approaches.
Proteomics: 2008, 8(19);4123-36
[PubMed:18763711] [WorldCat.org] [DOI] (I p)

Ken-ichi Yoshida, Hirotake Yamaguchi, Masaki Kinehara, Yo-hei Ohki, Yoshiko Nakaura, Yasutaro Fujita
Identification of additional TnrA-regulated genes of Bacillus subtilis associated with a TnrA box.
Mol. Microbiol.: 2003, 49(1);157-65
[PubMed:12823818] [WorldCat.org] [DOI] (P p)