ywqA

168

similar to SNF2 helicase

locus: BSU_36280

Molecular weight: 105.83 kDa

pI: 5.01

Protein length: 922 aa

Gene length: 2769 bp

function: unknown

product: unknown

essential: no

synonyms: ywqA

List of homologs in different organisms, belongs to COG0553 (Galperin et al., 2021)

Gene

Coordinates: 3,735,449  3,738,217

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The protein

Protein family

• [wiki|helicase family] (according to UniProt)
• SNF2/RAD54 helicase family (with [protein|565D91F3E0357C5B16CC342FCDA7EFD4B910829C|yqhH], according to UniProt)

[wiki|Domains]

• [wiki|Helicase ATP-binding domain] (aa 462-625) (according to UniProt)
• [wiki|Helicase C-terminal domain] (aa 753-907) (according to UniProt)

Structure

• [PDB|1Z6A] (from Sulfolobus solfataricus, the C-terminal domain (aa 445 ... 919), 47% identity) [pubmed|15882619]
• [AF|P94593]

Expression and Regulation

Operons

• genes: [gene|6AFE06E2F5A5382FBC656E6D532E1D8BFECC4DC2|ywqB]-[gene|265490FA83D6D3F178C26C9240E3CB224513BF42|ywqA]

  description: [Pubmed|22383849]

  additional information

  • An [wiki|ncRNA] is predicted for [gene|265490FA83D6D3F178C26C9240E3CB224513BF42|ywqA] [PubMed|20525796]

Biological materials

Mutant

• MGNA-A532 (ywqA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/532 NBRP B. subtilis, Japan]
• BKE36280 ([gene|265490FA83D6D3F178C26C9240E3CB224513BF42|ywqA]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE36280 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_TTGTTCGACGTGGATGAGAA,  downstream forward: _UP4_TAATCATGACTAAAAAAGCT
• BKK36280 ([gene|265490FA83D6D3F178C26C9240E3CB224513BF42|ywqA]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK36280 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_TTGTTCGACGTGGATGAGAA,  downstream forward: _UP4_TAATCATGACTAAAAAAGCT

References

• 9353933,20525796,24147116,15882619