ytlR

ytlR
168

unknown

locus
BSU_29940
Molecular weight
35.45 kDa
pI
10.07
Protein length
Gene length
function
unknown
product
unknown
essential
no
synonyms
ytlR

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG1597 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
3,063,833 → 3,064,762
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The protein
Protein family
diacylglycerol/lipid kinase family (with [protein|88AECCE90DC0D6C92C61AB8860A31A830A8DAC42|bmrU] and [protein|943294ACA74067A8549056699E08DF5B82337976|dgkB], according to UniProt)
[wiki|Domains]
DAGKc domain (1-134) (according to UniProt)
Structure
[PDB|2QV7] (Staphylococcus aureus diacylglycerol kinase, 25% identity) [pubmed|18611377]
[AF|O34799]
Expression and Regulation
Operons
genes
[gene|29A38D244A07ED0973D0846B652238524F4DBC67|ytlP]-[gene|DB1491F13F8B55A360413E815E47A2B51D24395C|ytlQ]-[gene|ED4C1EA16FF96DA20F12B972CD2458FA3B49DDA5|ytlR]-[gene|7D783DD180D950A4B030BF5EA78CCE930A466A07|amyX]
description
[pubmed|22383849]
sigma factors
[protein|7024E4162A6D827069F882FDEACA696EBC05DD40|sigD]: sigma factor, [Pubmed|26577401], in [regulon|protein:7024E4162A6D827069F882FDEACA696EBC05DD40|sigD regulon]
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[gene|29A38D244A07ED0973D0846B652238524F4DBC67|ytlP]->[gene|7D783DD180D950A4B030BF5EA78CCE930A466A07|amyX]

2024-03-28 16:48:17

Bzhu

42

2576b9a8551e42406fc3edaa2ce292ee1e219bc5

1F3E1F8E1B45662409D2F7E8989E008A048927D9

Biological materials
Mutant
MGNA-A433 (ytlR::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/433 NBRP B. subtilis, Japan]
BKE29940 (Δ[gene|ED4C1EA16FF96DA20F12B972CD2458FA3B49DDA5|ytlR]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE29940 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATCTTTCTCACCTGCTTAT,  downstream forward: _UP4_TAAACGTGTTTGGAGGAGAG
BKK29940 (Δ[gene|ED4C1EA16FF96DA20F12B972CD2458FA3B49DDA5|ytlR]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK29940 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATCTTTCTCACCTGCTTAT,  downstream forward: _UP4_TAAACGTGTTTGGAGGAGAG
References
26577401,18611377

ED4C1EA16FF96DA20F12B972CD2458FA3B49DDA5

Page visits: 1263

Time of last update: 2024-03-29 04:02:51

Author of last update: Melvin.boenninger