yrbC

168

similar to E. coli YebC putative transcription factor

locus: BSU_27820

Molecular weight: 26.56 kDa

pI: 4.43

Protein length: 240 aa

Gene length: 723 bp

function: unknown

product: unknown

essential: no

synonyms: yrbC

List of homologs in different organisms, belongs to COG0217 (Galperin et al., 2021)

Gene

Coordinates: 2,843,106  2,843,828

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The protein

Protein family

• TACO1 family (with [protein|227EC2A232A989ACE986726BD76CF5648C4CFA19|yeeI], according to UniProt)

Structure

• [PDB|1KON] (from E. coli, 50% identity)
• [AF|P94447]

Paralogous protein(s)

• [protein|227EC2A232A989ACE986726BD76CF5648C4CFA19|yeeI]

Expression and Regulation

Operons

• genes: [gene|7F690393007F0BE9BC375256ECC59228AE5174B5|yrbC]

  description: [Pubmed|22383849]

Biological materials

Mutant

• MGNA-A009 (yrbC::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/9 NBRP B. subtilis, Japan]
• BKE27820 ([gene|7F690393007F0BE9BC375256ECC59228AE5174B5|yrbC]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE27820 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATGTTTTCACCTTCTTTTA,  downstream forward: _UP4_TAAAAAACCGGCACGAGGTC
• BKK27820 ([gene|7F690393007F0BE9BC375256ECC59228AE5174B5|yrbC]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK27820 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATGTTTTCACCTTCTTTTA,  downstream forward: _UP4_TAAAAAACCGGCACGAGGTC