yodH

168

similar to methyltransferase

locus: BSU_19600

Molecular weight: 25.92 kDa

pI: 5.11

Protein length: 233 aa

Gene length: 702 bp

function: unknown

product: unknown

essential: no

synonyms: yodH

List of homologs in different organisms, belongs to COG2226 (Galperin et al., 2021)

Gene

Coordinates: 2,133,455  2,134,156

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The protein

Protein family

• [wiki|Methyltransferase superfamily] (according to UniProt)

Structure

• [AF|O34954]

Expression and Regulation

Operons

• genes: [gene|65F2152BF78AEC10E921D46E62D472B7FA74FA3A|yodH]-[gene|4D3BF0A60B7FBF7CC8C97F8AEF5B3F2A2D41979C|yodI]

  description: [Pubmed|22383849]

  regulation

  • expressed late during sporulation in the mother cell ([protein|search|SigK]) [Pubmed|15699190,15383836]

  sigma factors

  • [protein|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|sigK]: sigma factor, [Pubmed|15699190,15383836], in [regulon|protein:24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|sigK regulon]

Biological materials

Mutant

• MGNA-B438 (yodH::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1437 NBRP B. subtilis, Japan]
• BKE19600 ([gene|65F2152BF78AEC10E921D46E62D472B7FA74FA3A|yodH]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE19600 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CAATATCGAATCCTCCTTTT,  downstream forward: _UP4_TAAAACGGCGTATCGCCCCC
• BKK19600 ([gene|65F2152BF78AEC10E921D46E62D472B7FA74FA3A|yodH]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK19600 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CAATATCGAATCCTCCTTTT,  downstream forward: _UP4_TAAAACGGCGTATCGCCCCC

References

• 15699190,15383836