yodA

168

similar to malonate semialdehyde decarboxylase

locus: BSU_19530

Molecular weight: 14.46 kDa

pI: 4.74

Protein length: 129 aa

Gene length: 390 bp

function: unknown

product: unknown

essential: no

synonyms: yodA

List of homologs in different organisms

Gene

Coordinates: 2,126,549  2,126,938

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The protein

Protein family

• [wiki|4-oxalocrotonate tautomerase family] (according to UniProt)

Structure

• [PDB|2AAG] (from Pseudomonas pavonaceae, 52% identity) [pubmed|16274229]
• [AF|O34882]

Paralogous protein(s)

• [protein|877C25D538BAF1132290BAF7FBB2E7921B51266A|yusQ], [protein|9A56CC9B3C33D74A7349112930ADF627099DA907|yrdN]

Expression and Regulation

Operons

• genes: [gene|1F6B2CF88F5C6498A035FA0465136EF9D0BF93BC|yodA]

  description: [Pubmed|22383849]

Biological materials

Mutant

• MGNA-B432 (yodA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1431 NBRP B. subtilis, Japan]
• BKE19530 ([gene|1F6B2CF88F5C6498A035FA0465136EF9D0BF93BC|yodA]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE19530 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATGTGTACTCCTCCTCTTA,  downstream forward: _UP4_TAAGATTTCGTCTCCCCACA
• BKK19530 ([gene|1F6B2CF88F5C6498A035FA0465136EF9D0BF93BC|yodA]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK19530 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATGTGTACTCCTCCTCTTA,  downstream forward: _UP4_TAAGATTTCGTCTCCCCACA

References

Research papers

• 16274229