ymzB

168

general stress protein, survival of ethanol and salt stresses

locus: BSU_17240

Molecular weight: 13.25 kDa

pI: 4.44

Protein length: 118 aa

Gene length: 357 bp

function: survival of ethanol and salt stresses

product: unknown

essential: no

ec: null

synonyms: ymzB

List of homologs in different organisms

Gene

Coordinates: 1,860,014  1,860,370

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The protein

Structure

• [AF|O31786]

Expression and Regulation

Operons

• genes: [gene|3F53025AC42791F3378EAE5E7A0D6DC86C2765CF|ymaE]-[gene|5E811311BB4B5F637B768E526CE77FC91EE71C3E|ymzB]

  description: [Pubmed|20817675]

  regulation

  • induced by stress ([protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|sigB]) [Pubmed|15805528]

  regulatory mechanism

  • [protein|E5110D9C36E8C55AFD1419987B14A53232165F20|abrB]: repression, [Pubmed|20817675], in [regulon|protein:E5110D9C36E8C55AFD1419987B14A53232165F20|abrB regulon]

  sigma factors

  • [protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|sigB]: sigma factor, [Pubmed|15805528], in [regulon|protein:580011DE5DC40EC9E7E0512791D328FAA010DCB8|sigB regulon]

• genes: [gene|5E811311BB4B5F637B768E526CE77FC91EE71C3E|ymzB]

  description: [Pubmed|22383849]

Biological materials

Mutant

• MGNA-B108 (ymzB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1107 NBRP B. subtilis, Japan]
• BKE17240 ([gene|5E811311BB4B5F637B768E526CE77FC91EE71C3E|ymzB]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE17240 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATCAATATTCCTCCTTTTG,  downstream forward: _UP4_TGACAGCCACTTTCATCAAA
• BKK17240 ([gene|5E811311BB4B5F637B768E526CE77FC91EE71C3E|ymzB]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK17240 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATCAATATTCCTCCTTTTG,  downstream forward: _UP4_TGACAGCCACTTTCATCAAA

References

• 15805528,20817675