yloH

yloH
168

omega subunit of [wiki|RNA polymerase]

locus
BSU_15690
Molecular weight
7.62 kDa
pI
5.51
Protein length
Gene length
function
unknown
product
omega subunit of [wiki|RNA polymerase]
essential
no
ec
2.7.7.6
synonyms
yloH, rpoZ

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG1758 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
1,642,567  1,642,770
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The protein
Catalyzed reaction/ biological activity
ribonucleoside 5'-triphosphate + RNA(n) --> diphosphate + RNA(n+1) (according to UniProt)
Protein family
[wiki|RNA polymerase] subunit omega family (single member, according to UniProt)
Structure
[PDB|5UH5] (transcription initiation complex from Mycobacterium tuberculosis, 37% identity, aa 1- 52) [pubmed|28392175]
[AF|O35011]
[wiki|Localization]
closely associated with [wiki|RNA polymerase] involved in transcribing both mRNA and rRNA operons [Pubmed|20724389]
Expression and Regulation
Operons
genes
[gene|A57D2C1536F3E93CD687C28C59FF297355CAB303|yloC]-[gene|6AF1CB8998BE9C71DF4F1201A7F74FF7E75CB799|remA]-[gene|1BC994DE60A7BB35DEDD7154581A396D29AA94A7|gmk]-[gene|921933B6B893083F151AABDEDCBC65F2E55677BE|yloH]
description
[pubmed|22383849]
regulation
expressed during vegetative growth and early during sporulation in the forespore ([protein|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|sigF]) [Pubmed|23396918]
sigma factors
[protein|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|sigF]: sigma factor, [Pubmed|23396918], in [regulon|protein:CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|sigF regulon]
Open in new tab

[gene|A57D2C1536F3E93CD687C28C59FF297355CAB303|yloC]->[gene|921933B6B893083F151AABDEDCBC65F2E55677BE|yloH]

2024-03-13 23:00:50

Bzhu

84

b4ed2f235ea58a2cb7be55cafee822b895fe00c8

099190FEE74E539BB75FE227F5793536D7B467E8

genes
[gene|A57D2C1536F3E93CD687C28C59FF297355CAB303|yloC]-[gene|6AF1CB8998BE9C71DF4F1201A7F74FF7E75CB799|remA]-[gene|1BC994DE60A7BB35DEDD7154581A396D29AA94A7|gmk]-[gene|921933B6B893083F151AABDEDCBC65F2E55677BE|yloH]-[gene|2B67C63442F28F6BCBA3BA6DE4B563C73E8DF16C|yloI]-[gene|AF5ADDA2A98EC18BB72A81AA0336E639C0D1F430|priA]-[gene|3D41FB608DB70B9482312A1BBCCDBDA7FB713AFA|defA]-[gene|06971E9AAB033E2878914A76645F99E97CE8A90A|fmt]-[gene|1370D8783450D538C71E3DE8EA5B37DFEE073FF0|yloM]-[gene|5DEBD84E5937DB8B7F29C729FAA0076DF86A5451|yloN]
description
[pubmed|22383849]
Open in new tab

[gene|A57D2C1536F3E93CD687C28C59FF297355CAB303|yloC]->[gene|5DEBD84E5937DB8B7F29C729FAA0076DF86A5451|yloN]

2024-03-10 09:03:54

Jstuelk

93

67080d1e476b4c1544f46abe5db9b45c3ccd93f3

2C39B75EDCD294B0CAC1DECB4007285A35FDAE1D

genes
[gene|7821A09DADC6EAF589A882F05CC34BE900E06F2A|yloB]-[gene|A57D2C1536F3E93CD687C28C59FF297355CAB303|yloC]-[gene|6AF1CB8998BE9C71DF4F1201A7F74FF7E75CB799|remA]-[gene|1BC994DE60A7BB35DEDD7154581A396D29AA94A7|gmk]-[gene|921933B6B893083F151AABDEDCBC65F2E55677BE|yloH]
description
[pubmed|22383849]
regulation
expressed during sporulation in the mother cell [pubmed|12161109]
Open in new tab

[gene|7821A09DADC6EAF589A882F05CC34BE900E06F2A|yloB]->[gene|921933B6B893083F151AABDEDCBC65F2E55677BE|yloH]

2024-03-10 09:03:51

Jstuelk

94

b15c1f28629d3e15db14719be44c291dd5f28c5f

86CE620BD4E14CC259270F542702B302B7837CCD

Biological materials
Mutant
BKE15690 ([gene|921933B6B893083F151AABDEDCBC65F2E55677BE|yloH]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE15690 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_ATCAATTGACGGATCTAACA,  downstream forward: _UP4_TAGTAGCACAAGTAGCAACC
BKK15690 ([gene|921933B6B893083F151AABDEDCBC65F2E55677BE|yloH]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK15690 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_ATCAATTGACGGATCTAACA,  downstream forward: _UP4_TAGTAGCACAAGTAGCAACC
References
Reviews
22210308,25878038,32920946
Original Publications
36815589,11158566,20724389,26098117,28392175,27799328,36753546

921933B6B893083F151AABDEDCBC65F2E55677BE

Page visits: 2727

Time of last update: 2024-03-28 11:56:38

Author of last update: Jstuelk