ykvO

168

similar to glucose 1-dehydrogenase

locus: BSU_13770

Molecular weight: 26.10 kDa

pI: 4.56

Protein length: 248 aa

Gene length: 747 bp

function: unknown

product: unknown

essential: no

synonyms: ykvO

List of homologs in different organisms, belongs to COG1028 (Galperin et al., 2021)

Gene

Coordinates: 1,442,872  1,443,618

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The protein

Protein family

• [wiki|Short-chain dehydrogenases/reductases (SDR) family] (according to UniProt)

Structure

• [PDB|4FGS] (from ''Rhizobium etli'', 57% identity)
• [AF|O31680]

Paralogous protein(s)

• [protein|0DD474462720CAEE2AE17017BD7CA385238EBC6F|yxbG], [protein|20A7DBA142F3BF8DCAD9732BD908CE8CC79AA993|bacC], [protein|439B468A13137000FB42E9389391CB4986FFED84|fabG]
• [protein|5964B6E817260DA7937796DDFA753A665A04D650|fabL], (31,8%)
• [protein|6047F2493FCE3D2A9BDB1AD88E5926ECEED81036|yhxC], (32,5%)
• [protein|739B228743BC1FE9E6888E999BC0E4F615E36F9E|yhxD], (34,5%)
• [protein|B6FF689E65906186F3576B378650D713DB84EDDA|ycdF], (31,9%)
• [protein|CA4597C6253CCF7D7954686A30AF041808BDF8E5|gdh], (34,8%)
• [protein|CE990D33A12C50D22506A52E0099F7D97A762D4E|fadH], (33,6%)
• [protein|EAEEA4DD9641919830A81185333A2610B964D37C|yhdF], (35,1%)
• [protein|3161519994609DA9360ED6E073E4A4C8C6210EFB|ydaD], (37.5%),

Expression and Regulation

Operons

• genes: [gene|4DEFC2998464BF8327578C36A13A10DD277F991E|ykvO]

  description: [Pubmed|22383849]

Biological materials

Mutant

• MGNA-B327 (ykvO::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1326 NBRP B. subtilis, Japan]
• BKE13770 ([gene|4DEFC2998464BF8327578C36A13A10DD277F991E|ykvO]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE13770 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATACTTAACACTCCTTTAG,  downstream forward: _UP4_TAATTTCACTGCGCAGAGAT
• BKK13770 ([gene|4DEFC2998464BF8327578C36A13A10DD277F991E|ykvO]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK13770 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATACTTAACACTCCTTTAG,  downstream forward: _UP4_TAATTTCACTGCGCAGAGAT