yhcB

yhcB
168

similar to oxidoreductase

locus
BSU_09020
Molecular weight
18.87 kDa
pI
4.64
Protein length
Gene length
function
unknown
product
unknown
essential
no
synonyms
yhcB

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG0655 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
979,396  979,926
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The protein
[wiki|Domains]
[wiki|Flavodoxin-like domain] (aa 3-162) (according to UniProt)
Structure
[PDB|4LA4] (from Pseudomonas sp., 34% identity)
[AF|P54586]
Expression and Regulation
Operons
genes
[gene|EDDD61CF725449E57C72F63D378F6CD1FAC49ADA|yhbI]-[gene|211C58A92BA2A06A34B1F73BDB68A0F581B942C2|yhbJ]-[gene|93159DC7D5C42CFA54F66F232D73F38957243AB7|yhcA]-[gene|7797B0B66922D51B9D142DD2E5857836E47F015B|yhcB]-[gene|95EED3A91483502CA78067421F678B1EDB965B18|yhcC]
description
[Pubmed|22383849]
additional information
the mRNA is substantially stabilized upon depletion of [protein|872CCB5A49C9000BD95E4B0472556D5F60F7D7A4|RNase Y] (the half-life of the mRNA increases from 4 to 41 min) [PubMed|21815947]
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[gene|EDDD61CF725449E57C72F63D378F6CD1FAC49ADA|yhbI]→[gene|95EED3A91483502CA78067421F678B1EDB965B18|yhcC]

2024-03-23 22:50:00

Jstuelk

34

65b8eed6f6195e33988a759b72502a718556f155

51EDE59EF3FA1E0885DE1370B2F6E6D734862A76

Biological materials
Mutant
MGNA-B472 (yhcB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1471 NBRP B. subtilis, Japan]
BKE09020 ([gene|7797B0B66922D51B9D142DD2E5857836E47F015B|yhcB]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE09020 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTCAGGAAACCTCCCTGT,  downstream forward: _UP4_GCAGGACAGTAAGGAGAGGT
BKK09020 ([gene|7797B0B66922D51B9D142DD2E5857836E47F015B|yhcB]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK09020 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTCAGGAAACCTCCCTGT,  downstream forward: _UP4_GCAGGACAGTAAGGAGAGGT
References
21815947

7797B0B66922D51B9D142DD2E5857836E47F015B

Page visits: 1481

Time of last update: 2024-03-29 08:28:53

Author of last update: Melvin.boenninger