ydiG

ydiG
168

molybdenum cofactor biosynthesis protein

locus
BSU_05960
Molecular weight
18.31 kDa
pI
6.22
Protein length
Gene length
function
unknown
product
molybdenum cofactor biosynthesis protein
essential
no
ec
null
synonyms
ydiG, moaC

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG0315 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
646,582  647,094
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The protein
Catalyzed reaction/ biological activity
involved in the first step of molybdenum cofactor biosynthesis (together with [protein|19EB8E7CBC0E8D7A6429ADFFF93D1F71EFE3FF11|moaA])
(8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate --> cyclic pyranopterin phosphate + diphosphate (according to UniProt)
Protein family
moaC family (single member, according to UniProt)
Structure
[PDB|1EKR] (the protein from ''E. coli'', 51% identity, 78% similarity) [Pubmed|10903949]
[AF|O05520]
Expression and Regulation
Operons
genes
[gene|4A8D74B83E20FA138ED66F0D8FD456B69B740D92|ydiG]-[gene|B5EF521437323EF43F08E5EFDB5C798616CA499A|rex]-[gene|780FDF3DD260287428B397FFE7F44DDF1917381C|tatAY]-[gene|E60FC9C9B273DD6B07B7B95819525DE5F35113CE|tatCY]
description
[Pubmed|22383849]
regulation
constitutitvely expressed [Pubmed|22383849]
the mRNA is processed between [gene|B5EF521437323EF43F08E5EFDB5C798616CA499A|rex] and [gene|780FDF3DD260287428B397FFE7F44DDF1917381C|tatAY] by [protein|872CCB5A49C9000BD95E4B0472556D5F60F7D7A4|RNase Y], this requires the [protein|EE52DFA35B935E551871D079A9BE877DB2001A3B|ricA]-[protein|6C9A092F38739A3759793EF8B496569CD02C2E3F|ricF]-[protein|EBD15C174A03B7FCDFFE4C5DB5D86E93F1B9CAC4|ricT] complex [Pubmed|29794222]
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[gene|4A8D74B83E20FA138ED66F0D8FD456B69B740D92|ydiG]→[gene|E60FC9C9B273DD6B07B7B95819525DE5F35113CE|tatCY]

2024-03-18 11:47:03

Jstuelk

40

c85bb146dcdc740e3e21e01dea58cd7fd7dc9315

77618D8DC4FC5B69859BD5D38C3215E1FA8D50DF

Biological materials
Mutant
MGNA-C200 (ydiG::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2198 NBRP B. subtilis, Japan]
BKE05960 ([gene|4A8D74B83E20FA138ED66F0D8FD456B69B740D92|ydiG]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE05960 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATATTAAAACGCTCCTTAA,  downstream forward: _UP4_GAGTATAATTTGGAGGACCA
BKK05960 ([gene|4A8D74B83E20FA138ED66F0D8FD456B69B740D92|ydiG]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK05960 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATATTAAAACGCTCCTTAA,  downstream forward: _UP4_GAGTATAATTTGGAGGACCA
References
Reviews
23539623
Original Publications
10903949,22383849

4A8D74B83E20FA138ED66F0D8FD456B69B740D92

Page visits: 1670

Time of last update: 2024-03-27 13:16:48

Author of last update: Robert.warneke