ydcF

168

unknown

locus: BSU_04750

Molecular weight: 11.10 kDa

pI: 8.07

Protein length: 97 aa

Gene length: 294 bp

function: unknown

product: unknown

essential: no

synonyms: ydcF

List of homologs in different organisms

Gene

Coordinates: 524,492  524,785

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The protein

Structure

• [AF|P96623]

Paralogous protein(s)

• [protein|CA4597C6253CCF7D7954686A30AF041808BDF8E5|gdh]

Expression and Regulation

Operons

• genes: [gene|20D50DA11B864E6C719CC34BE27C7900893EA054|ydcF]-[gene|89AB146F447696EF1CBE219C9A2FB5CBB380F847|ydcG]-[gene|B7F5FA5C656D39970959BC857E93B78B1A063098|pamR]

  description: [pubmed|29240826,22383849]

  regulatory mechanism

  • [protein|B7F5FA5C656D39970959BC857E93B78B1A063098|pamR]: repression, [pubmed|29240826], in [regulon|protein:B7F5FA5C656D39970959BC857E93B78B1A063098|pamR regulon]

additional information

• the mRNA is very stable (> 15 min) [pubmed|12884008]

Biological materials

Mutant

• MGNA-C113 (ydcF::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2111 NBRP B. subtilis, Japan]
• BKE04750 ([gene|20D50DA11B864E6C719CC34BE27C7900893EA054|ydcF]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE04750 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTTTGAAATTGTCCTTTC,  downstream forward: _UP4_CATCTTTACGGAGGAGTGAT
• BKK04750 ([gene|20D50DA11B864E6C719CC34BE27C7900893EA054|ydcF]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK04750 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTTTGAAATTGTCCTTTC,  downstream forward: _UP4_CATCTTTACGGAGGAGTGAT

References

• 12884008,29240826