rbsC

168

ribose ABC transporter (permease)

locus: BSU_35950

Molecular weight: 33.63 kDa

pI: 10.31

Protein length: 322 aa

Gene length: 969 bp

function: ribose uptake

product: ribose ABC transporter (permease)

essential: no

ec: null

synonyms: rbsC

List of homologs in different organisms, belongs to COG1172 (Galperin et al., 2021)

Gene

Coordinates: 3,705,165 → 3,706,133

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The protein

Protein family

• [wiki|Binding-protein-dependent transport system permease family] (according to UniProt)

Structure

• [AF|P36948]

[wiki|Localization]

• cell membrane [Pubmed|10092453]

Expression and Regulation

Operons

• genes: [gene|77AEAC0F06B4D5F062D4A2740794B7BFDDA31096|rbsR]-[gene|C229BD2C00B169CF4A99482E65B3F749AD9D51D8|rbsK]-[gene|F0E6F191FAF8F279462B09BF1FE4C6C752A57803|rbsD]-[gene|AB4A686F62550F90F5BD8D27DAADC9C33F1DA1DB|rbsA]-[gene|F1258E31151E137A850811B0C851D473CEFFD43B|rbsC]-[gene|1D67888E79B09956F9258F4068546D8C67103549|rbsB]

  description: [Pubmed|7921236]

  regulation

  • expressed upon transition into the stationary phase ([protein|search|AbrB]) [Pubmed|7592460]

  regulatory mechanism

  • [protein|E39AFEB7B7F28969A35C4B51CC6E7819F71C79D9|ccpA]: repression, [Pubmed|7921236], in [regulon|protein:E39AFEB7B7F28969A35C4B51CC6E7819F71C79D9|ccpA regulon]
  • [protein|E5110D9C36E8C55AFD1419987B14A53232165F20|abrB]: activation, [Pubmed|7592460], in [regulon|protein:E5110D9C36E8C55AFD1419987B14A53232165F20|abrB regulon]

  sigma factors

  • [protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|sigA]: sigma factor, [Pubmed|7511775], in [regulon|protein:360F48D576DE950DF79C1A2677B7A35A8D8CC30C|sigA regulon]

Biological materials

Mutant

• BKE35950 (Δ[gene|F1258E31151E137A850811B0C851D473CEFFD43B|rbsC]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE35950 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATATTACCGCCCTCCCGTG,  downstream forward: _UP4_AAGTCAGCTTAGGAGGGTTT
• BKK35950 (Δ[gene|F1258E31151E137A850811B0C851D473CEFFD43B|rbsC]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK35950 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATATTACCGCCCTCCCGTG,  downstream forward: _UP4_AAGTCAGCTTAGGAGGGTTT

References

• 36815589,10092453,16872404,7511775,7592460,7921236