Difference between revisions of "YydK"

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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU40130&redirect=T BSU40130]
  
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yydK.html]
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yydK.html]
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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU40130&redirect=T BSU40130]
  
 
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=3BWG 3BWG]
 
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=3BWG 3BWG]

Revision as of 15:15, 2 April 2014

  • Description: similar to transcriptional regulator (GntR family)

Gene name yydK
Synonyms
Essential no
Product transcriptional regulator (GntR family)
Function unknown
Gene expression levels in SubtiExpress: yydK
MW, pI 27 kDa, 5.194
Gene length, protein length 708 bp, 236 aa
Immediate neighbours yyzE, yyzN
Sequences Protein DNA DNA_with_flanks
Genetic context
YydK context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YydK expression.png
























Categories containing this gene/protein

transcription factors and their control

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU40130

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon: yydK (according to [DBTBS])
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References