Difference between revisions of "YydK"

From SubtiWiki
Jump to: navigation, search
Line 98: Line 98:
 
* '''Operon:''' ''yydK'' (according to [[http://dbtbs.hgc.jp/COG/prom/yydK.html DBTBS]])
 
* '''Operon:''' ''yydK'' (according to [[http://dbtbs.hgc.jp/COG/prom/yydK.html DBTBS]])
  
* '''[[Sigma factor]]:'''  
+
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yydK_4123193_4123903_1 yydK] {{PubMed|22383849}}
 +
 
 +
* '''Sigma factor:'''  
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  

Revision as of 10:19, 17 April 2012

  • Description: similar to transcriptional regulator (GntR family)

Gene name yydK
Synonyms
Essential no
Product transcriptional regulator (GntR family)
Function unknown
MW, pI 27 kDa, 5.194
Gene length, protein length 708 bp, 236 aa
Immediate neighbours yyzE, yydJ
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YydK context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

transcription factors and their control

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU40130

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon: yydK (according to [DBTBS])
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References