Difference between revisions of "YydA"

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* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1TO0 1TO0]
 
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1TO0 1TO0]
  
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/Q45601 Q45601]
+
* '''UniProt:''' [http://www.uniprot.org/uniprot/Q45601 Q45601]
  
 
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU40230]
 
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU40230]

Revision as of 15:26, 20 July 2009

  • Description: unknown

Gene name yydA
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 17 kDa, 9.314
Gene length, protein length 477 bp, 159 aa
Immediate neighbours yydB, yycS
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YydA context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU40230

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing N3-methylpseudouridine (according to Swiss-Prot)
  • Protein family: RNA methyltransferase rlmH family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cytoplasm (according to Swiss-Prot)

Database entries

  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References