yydA

yydA
168

similar to pseudouridine methyltransferase

locus
BSU_40230
Molecular weight
17.93 kDa
pI
9.31
Protein length
Gene length
function
may be involved in maturation of 23S rRNA
product
similar to pseudouridine methyltransferase
essential
no
ec
null
synonyms
yydA

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG1576 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
4,134,436  4,134,915
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The protein
Catalyzed reaction/ biological activity
pseudouridine1915 in 23S rRNA + S-adenosyl-L-methionine --> H+ + N3-methylpseudouridine1915 in 23S rRNA + S-adenosyl-L-homocysteine (according to UniProt)
Protein family
RNA methyltransferase rlmH family (single member, according to UniProt)
Structure
[PDB|1TO0]
[AF|Q45601]
Expression and Regulation
Operons
genes
[gene|AC2A9DC3DA569231442582A95EDB2A98BA335184|yydA]
description
null
regulatory mechanism
[protein|6740108089F13116F200C15F35C2E7561E990FEB|dnaA]: repression, [Pubmed|17932079], in [regulon|protein:6740108089F13116F200C15F35C2E7561E990FEB|dnaA regulon]
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[gene|AC2A9DC3DA569231442582A95EDB2A98BA335184|yydA]

2024-02-15 03:53:14

Bzhu

36

a2480d1bfa95546f41edefa30265965a9b6cef77

67DC02B23005B8954A0054A619C76112D4636D1F

genes
[gene|660FD9F2AC911E4E70E242F14A2EA6A208F25E28|yyzF]-[gene|AC2A9DC3DA569231442582A95EDB2A98BA335184|yydA]-[gene|F30AA652362B7459D479345AB373D19FA1EAFBBF|yydB]-[gene|235399FB29FA7443D41AA9543EEB18F195503091|yydC]-[gene|1470E1E1BAE5EA5BA9831E2BCEF9B61E79450510|yydD]
description
[pubmed|22383849]
Open in new tab

[gene|660FD9F2AC911E4E70E242F14A2EA6A208F25E28|yyzF]->[gene|1470E1E1BAE5EA5BA9831E2BCEF9B61E79450510|yydD]

2024-02-01 07:32:44

Bzhu

50

48bf75e020e9f5fd2d9ef59908887dc7ee7a7e9f

E52B301591E08560585C6B02A1CBBF57AAE5EF23

Biological materials
Mutant
MGNA-B814 (yydA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1813 NBRP B. subtilis, Japan]
References
17932079,18755836,18755835,20817755

AC2A9DC3DA569231442582A95EDB2A98BA335184

Page visits: 3734

Time of last update: 2024-03-28 20:05:01

Author of last update: Melvin.boenninger