Difference between revisions of "YycB"

From SubtiWiki
Jump to: navigation, search
Line 57: Line 57:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU40480&redirect=T BSU40480]
  
 
* '''DBTBS entry:''' no entry
 
* '''DBTBS entry:''' no entry
Line 94: Line 95:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU40480&redirect=T BSU40480]
  
 
* '''Structure:'''
 
* '''Structure:'''

Revision as of 15:17, 2 April 2014

  • Description: similar to permeases

Gene name yycB
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yycB
MW, pI 43 kDa, 10.499
Gene length, protein length 1206 bp, 402 aa
Immediate neighbours yycC, yycA
Sequences Protein DNA DNA_with_flanks
Genetic context
YycB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YycB expression.png
























Categories containing this gene/protein

transporters/ other, membrane proteins

This gene is a member of the following regulons

TnrA regulon

The gene

Basic information

  • Locus tag: BSU40480

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cell membrane (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
    • repressed in the absence of good nitrogen sources (glutamine or ammonium) (TnrA) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References