yybE

yybE
168

similar to transcriptional regulator ([wiki|LysR family])

locus
BSU_40670
Molecular weight
31.26 kDa
pI
7.3
Protein length
Gene length
function
unknown
product
transcriptional regulator ([wiki|LysR family])
essential
no
synonyms
yybE

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG0583 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
4,180,564  4,181,442
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The protein
Protein family
[wiki|LysR family] (according to UniProt)
[wiki|Domains]
[wiki|HTH lysR-type domain] (aa 1-58) (according to UniProt)
Structure
[PDB|4X6G] (OxyR from Pseudomonas aeruginosa, 28% identity) [pubmed|25931525]
[AF|P37499]
Expression and Regulation
Operons
genes
[gene|9EC2800AF5B2B65BE3DEB4ABCCE7E448A24440DF|yybE]-[gene|DBEB1E43E1121D3D8AB6A0CA3BAF4072715F6577|yybD]-[gene|33C3EDF3709AC835C9C50B1B7978BA7C23EC9B9E|yybC]
description
[pubmed|22383849]
Open in new tab

[gene|9EC2800AF5B2B65BE3DEB4ABCCE7E448A24440DF|yybE]→[gene|33C3EDF3709AC835C9C50B1B7978BA7C23EC9B9E|yybC]

2024-02-06 11:40:16

Jstuelk

37

d1d6a9a2783f599617c6fcdfeafdbeb70047978e

88282EDDE31BC6122A49D4D16E0D2482942838CF

Biological materials
Mutant
MGNA-B849 (yybE::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1848 NBRP B. subtilis, Japan]
BKE40670 ([gene|9EC2800AF5B2B65BE3DEB4ABCCE7E448A24440DF|yybE]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE40670 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CAATTATCATCTCTCCTTAT,  downstream forward: _UP4_TTTTCTGAGTAGGAAGGATT
BKK40670 ([gene|9EC2800AF5B2B65BE3DEB4ABCCE7E448A24440DF|yybE]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK40670 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CAATTATCATCTCTCCTTAT,  downstream forward: _UP4_TTTTCTGAGTAGGAAGGATT
References
Research papers
25931525

9EC2800AF5B2B65BE3DEB4ABCCE7E448A24440DF

Page visits: 1711

Time of last update: 2024-03-29 05:36:40

Author of last update: Melvin.boenninger