Difference between revisions of "YxlF"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yxlG]]'', ''[[yxlE]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yxlG]]'', ''[[yxlE]]''
 
|-
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU38660 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU38660 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU38660 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU38660 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU38660 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU38660 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:yxlF_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yxlF_context.gif]]

Revision as of 11:37, 14 May 2013

Gene name yxlF
Synonyms
Essential no
Product ABC transporter (ATP-binding protein)
Function unknown
Gene expression levels in SubtiExpress: yxlF
Interactions involving this protein in SubtInteract: YxlF
MW, pI 33 kDa, 8.226
Gene length, protein length 885 bp, 295 aa
Immediate neighbours yxlG, yxlE
Sequences Protein DNA DNA_with_flanks
Genetic context
YxlF context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YxlF expression.png
























Categories containing this gene/protein

ABC transporters, cell envelope stress proteins (controlled by SigM, V, W, X, Y), membrane proteins

This gene is a member of the following regulons

SigY regulon

The gene

Basic information

  • Locus tag: BSU38660

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Localization: membrane associated (via YxlG) PubMed

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Shigeo Tojo, Masayuki Matsunaga, Takashi Matsumoto, Choong-Min Kang, Hirotake Yamaguchi, Kei Asai, Yoshito Sadaie, Ken-ichi Yoshida, Yasutaro Fujita
Organization and expression of the Bacillus subtilis sigY operon.
J Biochem: 2003, 134(6);935-46
[PubMed:14769884] [WorldCat.org] [DOI] (P p)

Min Cao, Letal Salzberg, Ching Sung Tsai, Thorsten Mascher, Carla Bonilla, Tao Wang, Rick W Ye, Leticia Márquez-Magaña, John D Helmann
Regulation of the Bacillus subtilis extracytoplasmic function protein sigma(Y) and its target promoters.
J Bacteriol: 2003, 185(16);4883-90
[PubMed:12897008] [WorldCat.org] [DOI] (P p)

Y Quentin, G Fichant, F Denizot
Inventory, assembly and analysis of Bacillus subtilis ABC transport systems.
J Mol Biol: 1999, 287(3);467-84
[PubMed:10092453] [WorldCat.org] [DOI] (P p)