Difference between revisions of "YxjC"

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* '''Description:''' unknown <br/><br/>
+
* '''Description:''' sporulation protein<br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
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=Expression and regulation=
 
=Expression and regulation=
 +
* '''Operon:''' ''[[yxjC]]-[[scoA]]-[[scoB]]-[[yxjF]]'' {{PubMed|10746760}}
  
* '''Operon:''' ''[[yxjC]]-[[scoA]]-[[scoB]]-[[yxjF]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/10746760 PubMed]
+
* '''[[Sigma factor]]:''' [[SigE]] {{PubMed|12662922}}
 
 
* '''[[Sigma factor]]:'''
 
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
 +
** repressed by glucose ([[CcpA]]) {{PubMed|12850135,10666464}} 
 +
** expressed early during sporulation in the mother cell ([[SigE]]) {{PubMed|12662922}}
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
 +
** [[CcpA]]: transcription repression {{PubMed|12850135,10666464}}
  
 
* '''Additional information:'''
 
* '''Additional information:'''
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=References=
 
=References=
  
<pubmed>16672620,, </pubmed>
+
<pubmed>16672620,10746760,12662922 12850135,10666464</pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 10:35, 7 February 2010

  • Description: sporulation protein

Gene name yxjC
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 49 kDa, 8.897
Gene length, protein length 1416 bp, 472 aa
Immediate neighbours scoA, yxjB
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YxjC context.gif
This image was kindly provided by SubtiList




The gene

Basic information

  • Locus tag: BSU39000

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cell membrane (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • repressed by glucose (CcpA) PubMed
    • expressed early during sporulation in the mother cell (SigE) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References