yxbC

yxbC
168

unknown

locus
BSU_39880
Molecular weight
37.30 kDa
pI
4.59
Protein length
Gene length
function
unknown
product
unknown
essential
no
ec
null
synonyms
yxbC, yxaQ

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG2850 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
4,095,915  4,096,907
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The protein
Protein family
ROX family (single member, according to UniProt)
[wiki|Domains]
JmjC domain (aa 96-256) (according to UniProt)
Structure
[PDB|1VRB]
[AF|P46327]
Expression and Regulation
Operons
genes
[gene|A9815CF5DA9D8852F387DAF94CC26E95F1E4AC25|yxbC]-[gene|4DB53AE08A4E4841D0411A5590CC09A6ECC8E74E|yxbD]
description
[Pubmed|10746760]
regulation
expressed under conditions that trigger sporulation ([wiki|Spo0A]) [Pubmed|14651647]
regulatory mechanism
[protein|2C54FE2ADC82FF414D732018C90649D477A925AD|spo0A]: activation, [Pubmed|14651647], in [regulon|protein:2C54FE2ADC82FF414D732018C90649D477A925AD|spo0A regulon]
[protein|90ACE0DECA58D3C1A55E135120F7A0C1C920571C|codY]: repression, [Pubmed|12618455], in [regulon|protein:90ACE0DECA58D3C1A55E135120F7A0C1C920571C|codY regulon]
[protein|E5110D9C36E8C55AFD1419987B14A53232165F20|abrB]: repression, [Pubmed|15101989], in [regulon|protein:E5110D9C36E8C55AFD1419987B14A53232165F20|abrB regulon]
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[gene|A9815CF5DA9D8852F387DAF94CC26E95F1E4AC25|yxbC]→[gene|4DB53AE08A4E4841D0411A5590CC09A6ECC8E74E|yxbD]

2024-02-27 15:27:45

ghost

36

b750b5d707b04c77f152e92372d8d212d8910d86

3B1B9441860A092B81B6EE60EA875E55BF003D31

Biological materials
Mutant
MGNA-B691 (yxbC::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1690 NBRP B. subtilis, Japan]
BKE39880 ([gene|A9815CF5DA9D8852F387DAF94CC26E95F1E4AC25|yxbC]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE39880 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATATTATCCCTCCCAAAAA,  downstream forward: _UP4_TAGTAAATACTAGATAAGGG
BKK39880 ([gene|A9815CF5DA9D8852F387DAF94CC26E95F1E4AC25|yxbC]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK39880 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATATTATCCCTCCCAAAAA,  downstream forward: _UP4_TAGTAAATACTAGATAAGGG
References
10746760,18083814,12618455,14651647,12618455,15101989

A9815CF5DA9D8852F387DAF94CC26E95F1E4AC25

Page visits: 2971

Time of last update: 2024-03-28 19:33:39

Author of last update: Melvin.boenninger