Difference between revisions of "YwoC"

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(Categories containing this gene/protein)
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= This gene is a member of the following [[regulons]] =
 
= This gene is a member of the following [[regulons]] =
 
+
{{SubtiWiki regulon|[[YtrA regulon]]}}
  
 
=The gene=
 
=The gene=
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* '''Effectors of protein activity:'''
 
* '''Effectors of protein activity:'''
  
* '''Interactions:'''
+
* '''[[SubtInteract|Interactions]]:'''
  
* '''Localization:'''
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* '''[[Localization]]:'''
  
 
=== Database entries ===
 
=== Database entries ===
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=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:'''  
+
* '''Operon:''' ''[[ywoB]]-[[ywoC]]-[[ywoD]]'' {{PubMed|21856850}}
  
* '''[[Sigma factor]]:'''  
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* '''[[Sigma factor]]:''' [[SigA]] {{PubMed|21856850}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
 +
** induced by ramoplanin ([[YtrA]]) {{PubMed|21856850}}
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
 +
** [[YtrA]]: transcription repression {{PubMed|21856850}}
  
 
* '''Additional information:'''
 
* '''Additional information:'''
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=References=
 
=References=
 
+
'''Additional publications:''' {{PubMed|21856850}}
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 15:21, 24 August 2011

  • Description: unknown

Gene name ywoC
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 20 kDa, 4.621
Gene length, protein length 567 bp, 189 aa
Immediate neighbours ywoD, ywoB
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YwoC context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

proteins of unknown function

This gene is a member of the following regulons

YtrA regulon

The gene

Basic information

  • Locus tag: BSU36490

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

  • The E.coli homolog: yecD

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: isochorismatase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed