ywjB

ywjB
168

unknown

locus
BSU_37220
Molecular weight
19.44 kDa
pI
4.53
Protein length
Gene length
function
unknown
product
unknown
essential
no
synonyms
ywjB

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG0262 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
3,819,220  3,819,744
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The protein
Structure
[PDB|2GD9] ([protein|E2CABD337831904871E0F0260DAA992E41A4F9E0|yyaP], 31% identity)
[AF|P45862]
Paralogous protein(s)
[protein|E2CABD337831904871E0F0260DAA992E41A4F9E0|yyaP]
[wiki|Localization]
membrane (according to UniProt)
Expression and Regulation
Operons
genes
[gene|07752EC6940F43DEBD1E9313A2A195E35EDB9F69|ywiE]-[gene|D5A3C316BD4567A0155F70330E32ACDE18F063FE|ywjA]-[gene|685B58AD2A02A0B48B7D4AAAE046DE2CF8F77C58|ywjB]
description
[pubmed|22383849]
regulatory mechanism
[protein|F899F1EE27E6D503BCC06BC52E3C7FD80B8EF725|fur]: repression, [pubmed|12354229], in [regulon|protein:F899F1EE27E6D503BCC06BC52E3C7FD80B8EF725|fur regulon]
sigma factors
[protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|sigB]: sigma factor, [Pubmed|26577401], in [regulon|protein:580011DE5DC40EC9E7E0512791D328FAA010DCB8|sigB regulon]
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[gene|07752EC6940F43DEBD1E9313A2A195E35EDB9F69|ywiE]->[gene|685B58AD2A02A0B48B7D4AAAE046DE2CF8F77C58|ywjB]

2024-03-20 01:56:29

Bzhu

32

212b18f4698de19cc17ce4d25e56c42b2e6ee3aa

1388A2364B0BC385CFA90298AFC1348C8DFABFBB

genes
[gene|D5A3C316BD4567A0155F70330E32ACDE18F063FE|ywjA]-[gene|685B58AD2A02A0B48B7D4AAAE046DE2CF8F77C58|ywjB]
description
[pubmed|22383849]
Open in new tab

[gene|D5A3C316BD4567A0155F70330E32ACDE18F063FE|ywjA]->[gene|685B58AD2A02A0B48B7D4AAAE046DE2CF8F77C58|ywjB]

2024-02-09 17:14:33

Bzhu

40

6eff6d033346d8ef043489abb2fed27db7b585c7

6CEEBC9D0EB07CCE364936AB1A948F2DA1B1005D

genes
[gene|685B58AD2A02A0B48B7D4AAAE046DE2CF8F77C58|ywjB]
description
[Pubmed|9353933]
regulation
repressed unless the cells enter an iron starvation ([protein|search|Fur]) [Pubmed|12354229]
regulatory mechanism
[protein|F899F1EE27E6D503BCC06BC52E3C7FD80B8EF725|fur]: repression, [pubmed|12354229], in [regulon|protein:F899F1EE27E6D503BCC06BC52E3C7FD80B8EF725|fur regulon]
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[gene|685B58AD2A02A0B48B7D4AAAE046DE2CF8F77C58|ywjB]

2024-03-24 02:59:00

ghost

35

8c825b9daee6126af33b31ff8ac6b3aaefa73f28

B86BD3EEEEFB1C3F59FE7BBF5DBCB64F23387C27

Biological materials
Mutant
MGNA-B661 (ywjB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1660 NBRP B. subtilis, Japan]
BKE37220 ([gene|685B58AD2A02A0B48B7D4AAAE046DE2CF8F77C58|ywjB]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE37220 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATGTTCTCCTCCTATCGAT,  downstream forward: _UP4_TAAGAAAAAGGATAGACAGA
BKK37220 ([gene|685B58AD2A02A0B48B7D4AAAE046DE2CF8F77C58|ywjB]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK37220 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATGTTCTCCTCCTATCGAT,  downstream forward: _UP4_TAAGAAAAAGGATAGACAGA
References
12354229,9353933

685B58AD2A02A0B48B7D4AAAE046DE2CF8F77C58

Page visits: 1674

Time of last update: 2024-03-27 15:24:52

Author of last update: Melvin.boenninger