Difference between revisions of "YwjB"

From SubtiWiki
Jump to: navigation, search
Line 122: Line 122:
  
 
* '''Additional information:'''
 
* '''Additional information:'''
 +
** number of protein molecules per cell (minimal medium with glucose and ammonium): 532 {{PubMed|24696501}}
  
 
=Biological materials =
 
=Biological materials =

Revision as of 10:06, 17 April 2014

  • Description: unknown

Gene name ywjB
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: ywjB
MW, pI 19 kDa, 4.53
Gene length, protein length 522 bp, 174 aa
Immediate neighbours ywjC, ywjA
Sequences Protein DNA DNA_with_flanks
Genetic context
YwjB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YwjB expression.png
























Categories containing this gene/protein

membrane proteins, proteins of unknown function

This gene is a member of the following regulons

Fur regulon

The gene

Basic information

  • Locus tag: BSU37220

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: membrane (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
    • repressed unless the cells enter an iron starvation (Fur) PubMed
  • Regulatory mechanism:
  • Additional information:
    • number of protein molecules per cell (minimal medium with glucose and ammonium): 532 PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Noel Baichoo, Tao Wang, Rick Ye, John D Helmann
Global analysis of the Bacillus subtilis Fur regulon and the iron starvation stimulon.
Mol Microbiol: 2002, 45(6);1613-29
[PubMed:12354229] [WorldCat.org] [DOI] (P p)

E Presecan, I Moszer, L Boursier, H Cruz Ramos, V de la Fuente, M-F Hullo, C Lelong, S Schleich, A Sekowska, B H Song, G Villani, F Kunst, A Danchin, P Glaser
The Bacillus subtilis genome from gerBC (311 degrees) to licR (334 degrees).
Microbiology (Reading): 1997, 143 ( Pt 10);3313-3328
[PubMed:9353933] [WorldCat.org] [DOI] (P p)