Difference between revisions of "YwcA"

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(Extended information on the protein)
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= [[Categories]] containing this gene/protein =
 
= [[Categories]] containing this gene/protein =
 
{{SubtiWiki category|[[transporters/ other]]}},
 
{{SubtiWiki category|[[transporters/ other]]}},
{{SubtiWiki category|[[membrane proteins]]}}
+
{{SubtiWiki category|[[membrane proteins]]}},
 +
{{SubtiWiki category|[[sporulation proteins]]}}
  
 
= This gene is a member of the following [[regulons]] =
 
= This gene is a member of the following [[regulons]] =
 
+
{{SubtiWiki regulon|[[SigE regulon]]}}
  
 
=The gene=
 
=The gene=
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* '''Operon:'''  
 
* '''Operon:'''  
 
** ''[[slrA]]-[[ywcB]]-[[ywcA]]''
 
** ''[[slrA]]-[[ywcB]]-[[ywcA]]''
 +
** ''[[ywcB]]-[[ywcA]]''
  
* '''[[Sigma factor]]:'''  
+
* '''[[Sigma factor]]:'''
 +
** ''[[ywcB]]'': [[SigE]] {{PubMed|15699190}}
  
* '''Regulation:'''  
+
* '''Regulation:''' expressed during sporulation ([[SigE]]) {{PubMed|15699190}}
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
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=References=
 
=References=
 +
<pubmed> 15699190 </pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 17:08, 3 November 2011

  • Description: similar to Na+-dependent symport

Gene name ywcA
Synonyms ipa-31r
Essential no
Product unknown
Function unknown
MW, pI 54 kDa, 7.201
Gene length, protein length 1548 bp, 516 aa
Immediate neighbours ywcB, ywbO
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YwcA context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

transporters/ other, membrane proteins, sporulation proteins

This gene is a member of the following regulons

SigE regulon

The gene

Basic information

  • Locus tag: BSU38240

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation: expressed during sporulation (SigE) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Leif Steil, Mónica Serrano, Adriano O Henriques, Uwe Völker
Genome-wide analysis of temporally regulated and compartment-specific gene expression in sporulating cells of Bacillus subtilis.
Microbiology (Reading): 2005, 151(Pt 2);399-420
[PubMed:15699190] [WorldCat.org] [DOI] (P p)