Difference between revisions of "YvdE"
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|style="background:#ABCDEF;" align="center"|'''Function''' || probably regulation of starch and maltodextrin utilization | |style="background:#ABCDEF;" align="center"|'''Function''' || probably regulation of starch and maltodextrin utilization | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU34630 yvdE] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 35 kDa, 7.093 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 35 kDa, 7.093 | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yvdF]]'', ''[[yvdD]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yvdF]]'', ''[[yvdD]]'' | ||
|- | |- | ||
| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU34630 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU34630 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU34630 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:yvdE_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yvdE_context.gif]] | ||
Revision as of 13:56, 13 May 2013
- Description: similar to transcriptional regulator (LacI family), probably regulator of starch and maltodextrin utilization
| Gene name | yvdE |
| Synonyms | mdxR |
| Essential | no |
| Product | transcriptional regulator (LacI family) |
| Function | probably regulation of starch and maltodextrin utilization |
| Gene expression levels in SubtiExpress: yvdE | |
| MW, pI | 35 kDa, 7.093 |
| Gene length, protein length | 948 bp, 316 aa |
| Immediate neighbours | yvdF, yvdD |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
utilization of specific carbon sources, transcription factors and their control
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU34630
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: LacI family
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: O06987
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Stefan Schönert, Sabine Seitz, Holger Krafft, Eva-Anne Feuerbaum, Iris Andernach, Gabriele Witz, Michael K Dahl
Maltose and maltodextrin utilization by Bacillus subtilis.
J Bacteriol: 2006, 188(11);3911-22
[PubMed:16707683]
[WorldCat.org]
[DOI]
(P p)
